Research on muscle fatigue during dynamic movement using surface electromyography (sEMG) constitutes a significant challenge within biomechanics. Despite a degree of standardization, measurements and their resultant findings continue to attract considerable debate, attributable to factors such as skin impedance, perspiration, and electrode displacement, as well as subjective fatigue perception. Further questions remain regarding signal normalization and the selection of appropriate analytical methodologies. Recent years have witnessed notable progress in dynamic fatigue research, highlighting the limitations of classical metrics (e.g., EMG Median Frequency) and introducing time–frequency methods, such as the wavelet transform (WT), which are better equipped to handle signal non-stationarity. Interest has also expanded to include non-linear metrics (e.g., entropy) and the analysis of multiple signals (EMG, accelerometers, fNIRS, EEG). The inherent complexity of conducting studies under conditions that approximate real-world sporting disciplines requires the consideration of the influence of various confounding factors. The judicious selection of relevant physical activities and the rigorous validation of the measurement apparatus are paramount for the accurate execution of the calculations. Current research is substantially predicated on artificial intelligence (AI) algorithms. The synergistic application of AI with wavelet transform, particularly in the decomposition and extraction of EMG signals, demonstrates efficacy in fatigue detection. Nevertheless, the full realization of these potential mandates requires further investigation into system generalization, the integration of data from multiple sensors, and the standardization of protocols, coupled with the establishment of publicly accessible datasets. This article delineates selected guidelines and challenges pertinent to the planning and execution of research on muscle fatigue in dynamic movement, focusing on activity selection, equipment validation, EMG signal analysis, and AI utilization.